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Imagej calibrate
Imagej calibrate









imagej calibrate

Training dataset measurements of immunofluorescence retina nuclear layers disclosed no significant differences between TT and any observer's average outer nuclear layer (ONL) (p = 0.998), inner nuclear layer (INL) (p = 0.807), and ONL/INL ratio (p = 0.944) measurements. In the calibration dataset, there were no differences in layer thickness between measured and known thickness masks, with an overall coefficient of variation of 0.00%. Finally, we tested the performance of TT measurements in a validation dataset of retinal detachment images.

IMAGEJ CALIBRATE MANUAL

Following, we created a training dataset and performed an agreement analysis of thickness measurements between TT and two masked manual observers. To calibrate TT, we created a calibration dataset of mock binary skeletonized mask images with increasing thickness masks and different rotations. We developed the ThicknessTool (TT), an automated thickness measurement plugin for the ImageJ platform.

  • Molecular Bases of Eyes Diseases Training Programĭate Published:2020 Oct 28 Abstract:To develop an automated retina layer thickness measurement tool for the ImageJ platform, to quantitate nuclear layers following the retina contour.
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    Imagej calibrate